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Lawrence Berkeley National Laboratory's Articles

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Page 5 of 43

Development of genetic tools for the thermophilic filamentous fungus Thermoascus aurantiacus

Authors: Raphael Gabriel, Julia Prinz, Marina Jecmenica, Carlos Romero-Vazquez, Pallas Chou, Simon Harth, Lena Floerl, Laure Curran, Anne Oostlander, Linda Matz, Susanne Fritsche, Jennifer Gorman, Timo Schuerg, André Fleißner and Steven W. Singer

Citation: Biotechnology for Biofuels 2020 13:167

Content type: Research Published on: 10 October 2020
ADEPT: a domain independent sequence alignment strategy for gpu architectures

Authors: Muaaz G. Awan, Jack Deslippe, Aydin Buluc, Oguz Selvitopi, Steven Hofmeyr, Leonid Oliker and Katherine Yelick

Citation: BMC Bioinformatics 2020 21:406

Content type: Software Published on: 15 September 2020
Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation

Authors: Maren Wehrs, Mitchell G. Thompson, Deepanwita Banerjee, Jan-Philip Prahl, Norma M. Morella, Carolina A. Barcelos, Jadie Moon, Zak Costello, Jay D. Keasling, Patrick M. Shih, Deepti Tanjore and Aindrila Mukhopadhyay

Citation: Microbial Cell Factories 2020 19:167

Content type: Research Published on: 18 August 2020
Normalization of CSF pTau measurement by Aβ₄₀ improves its performance as a biomarker of Alzheimer’s disease

Authors: Tengfei Guo, Deniz Korman, Renaud La Joie, Leslie M. Shaw, John Q. Trojanowski, William J. Jagust and Susan M. Landau

Citation: Alzheimer's Research & Therapy 2020 12:97

Content type: Research Published on: 15 August 2020
Microscale thermophoresis as a powerful tool for screening glycosyltransferases involved in cell wall biosynthesis

Authors: Wanchen Shao, Rita Sharma, Mads H. Clausen and Henrik V. Scheller

Citation: Plant Methods 2020 16:99

Content type: Methodology Published on: 28 July 2020
Climate mediates continental scale patterns of stream microbial functional diversity

Authors: Félix Picazo, Annika Vilmi, Juha Aalto, Janne Soininen, Emilio O. Casamayor, Yongqin Liu, Qinglong Wu, Lijuan Ren, Jizhong Zhou, Ji Shen and Jianjun Wang

Citation: Microbiome 2020 8:92

Content type: Research Published on: 13 June 2020
Correction to: Relevance of biomarkers across different neurodegenerative diseases

Authors: Alexander J. Ehrenberg, Ayesha Khatun, Emma Coomans, Matthew J. Betts, Federica Capraro, Elisabeth H. Thijssen, Konstantin Senkevich, Tehmina Bharucha, Mehrsa Jafarpour, Peter N. E. Young, William Jagust, Stephen F. Carter, Tammaryn Lashley, Lea T. Grinberg, Joana B. Pereira, Niklas Mattsson-Carlgren…

Citation: Alzheimer's Research & Therapy 2020 12:71

Content type: Correction Published on: 9 June 2020

The original article was published in Alzheimer's Research & Therapy 2020 12:56
Winter warming in Alaska accelerates lignin decomposition contributed by Proteobacteria

Authors: Xuanyu Tao, Jiajie Feng, Yunfeng Yang, Gangsheng Wang, Renmao Tian, Fenliang Fan, Daliang Ning, Colin T. Bates, Lauren Hale, Mengting M. Yuan, Linwei Wu, Qun Gao, Jiesi Lei, Edward A. G. Schuur, Julian Yu, Rosvel Bracho…

Citation: Microbiome 2020 8:84

Content type: Research Published on: 5 June 2020
Role of immune cells in the removal of deleterious senescent cells

Authors: Abhijit Kale, Amit Sharma, Alexandra Stolzing, Pierre-Yves Desprez and Judith Campisi

Citation: Immunity & Ageing 2020 17:16

Content type: Review Published on: 3 June 2020
Correction to: Genetic and metabolic links between the murine microbiome and memory

Authors: Jian-Hua Mao, Young-Mo Kim, Yan-Xia Zhou, Dehong Hu, Chenhan Zhong, Hang Chang, Colin J. Brislawn, Sarah Fansler, Sasha Langley, Yunshan Wang, B. Y. Loulou Peisl, Susan E. Celniker, David W. Threadgill, Paul Wilmes, Galya Orr, Thomas O. Metz…

Citation: Microbiome 2020 8:73

Content type: Correction Published on: 28 May 2020

The original article was published in Microbiome 2020 8:53
Relevance of biomarkers across different neurodegenerative diseases

Authors: Alexander J. Ehrenberg, Ayesha Khatun, Emma Coomans, Matthew J. Betts, Federica Capraro, Elisabeth H. Thijssen, Konstantin Senkevich, Tehmina Bharucha, Mehrsa Jafarpour, Peter N. E. Young, William Jagust, Stephen F. Carter, Tammaryn Lashley, Lea T. Grinberg, Joana B. Pereira, Niklas Mattsson-Carlgren…

Citation: Alzheimer's Research & Therapy 2020 12:56

Content type: Review Published on: 13 May 2020

The Correction to this article has been published in Alzheimer's Research & Therapy 2020 12:71
Imaging biomarkers in neurodegeneration: current and future practices

Authors: Peter N. E. Young, Mar Estarellas, Emma Coomans, Meera Srikrishna, Helen Beaumont, Anne Maass, Ashwin V. Venkataraman, Rikki Lissaman, Daniel Jiménez, Matthew J. Betts, Eimear McGlinchey, David Berron, Antoinette O’Connor, Nick C. Fox, Joana B. Pereira, William Jagust…

Citation: Alzheimer's Research & Therapy 2020 12:49

Content type: Review Published on: 27 April 2020
Genetic and metabolic links between the murine microbiome and memory

Authors: Jian-Hua Mao, Young-Mo Kim, Yan-Xia Zhou, Dehong Hu, Chenhan Zhong, Hang Chang, Colin J. Brislawn, Sarah Fansler, Sasha Langley, Yunshan Wang, B. Y. Loulou Peisl, Susan E. Celniker, David W. Threadgill, Paul Wilmes, Galya Orr, Thomas O. Metz…

Citation: Microbiome 2020 8:53

Content type: Research Published on: 16 April 2020

The Correction to this article has been published in Microbiome 2020 8:73
Strategies for the production of biochemicals in bioenergy crops

Authors: Chien-Yuan Lin and Aymerick Eudes

Citation: Biotechnology for Biofuels 2020 13:71

Content type: Review Published on: 15 April 2020
Succession of physiological stages hallmarks the transcriptomic response of the fungus Aspergillus niger to lignocellulose

Authors: Jolanda M. van Munster, Paul Daly, Martin J. Blythe, Roger Ibbett, Matt Kokolski, Sanyasi Gaddipati, Erika Lindquist, Vasanth R. Singan, Kerrie W. Barry, Anna Lipzen, Chew Yee Ngan, Christopher J. Petzold, Leanne Jade G. Chan, Mikko Arvas, Roxane Raulo, Steven T. Pullan…

Citation: Biotechnology for Biofuels 2020 13:69

Content type: Research Published on: 13 April 2020
Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest

Authors: Michael E. Sparks, Raman Bansal, Joshua B. Benoit, Michael B. Blackburn, Hsu Chao, Mengyao Chen, Sammy Cheng, Christopher Childers, Huyen Dinh, Harsha Vardhan Doddapaneni, Shannon Dugan, Elena N. Elpidina, David W. Farrow, Markus Friedrich, Richard A. Gibbs, Brantley Hall…

Citation: BMC Genomics 2020 21:227

Content type: Research article Published on: 14 March 2020
Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil

Authors: Agnieszka Klonowska, Lionel Moulin, Julie Kaye Ardley, Florence Braun, Margaret Mary Gollagher, Jaco Daniel Zandberg, Dora Vasileva Marinova, Marcel Huntemann, T. B. K. Reddy, Neha Jacob Varghese, Tanja Woyke, Natalia Ivanova, Rekha Seshadri, Nikos Kyrpides and Wayne Gerald Reeve

Citation: BMC Genomics 2020 21:214

Content type: Research article Published on: 6 March 2020
Agrobacterium-mediated transient transformation of sorghum leaves for accelerating functional genomics and genome editing studies

Authors: Rita Sharma, Yan Liang, Mi Yeon Lee, Venkataramana R. Pidatala, Jenny C. Mortimer and Henrik V. Scheller

Citation: BMC Research Notes 2020 13:116

Content type: Research note Published on: 27 February 2020
Biclique: an R package for maximal biclique enumeration in bipartite graphs

Authors: Yuping Lu, Charles A. Phillips and Michael A. Langston

Citation: BMC Research Notes 2020 13:88

Content type: Research note Published on: 21 February 2020
Metatranscriptomic dynamics after Verticillium dahliae infection and root damage in Olea europaea

Authors: Jose Manuel Martí, Luis F. Arias-Giraldo, Wladimiro Díaz-Villanueva, Vicente Arnau, Antonio Rodríguez-Franco and Carlos P. Garay

Citation: BMC Plant Biology 2020 20:79

Content type: Research Article Published on: 17 February 2020

Lawrence Berkeley National Laboratory

Lawrence Berkeley National Laboratory's Articles

Development of genetic tools for the thermophilic filamentous fungus Thermoascus aurantiacus

ADEPT: a domain independent sequence alignment strategy for gpu architectures

Investigation of Bar-seq as a method to study population dynamics of Saccharomyces cerevisiae deletion library during bioreactor cultivation

Normalization of CSF pTau measurement by Aβ₄₀ improves its performance as a biomarker of Alzheimer’s disease

Microscale thermophoresis as a powerful tool for screening glycosyltransferases involved in cell wall biosynthesis

Climate mediates continental scale patterns of stream microbial functional diversity

Correction to: Relevance of biomarkers across different neurodegenerative diseases

Winter warming in Alaska accelerates lignin decomposition contributed by Proteobacteria

Role of immune cells in the removal of deleterious senescent cells

Correction to: Genetic and metabolic links between the murine microbiome and memory

Relevance of biomarkers across different neurodegenerative diseases

Imaging biomarkers in neurodegeneration: current and future practices

Genetic and metabolic links between the murine microbiome and memory

Strategies for the production of biochemicals in bioenergy crops

Succession of physiological stages hallmarks the transcriptomic response of the fungus Aspergillus niger to lignocellulose

Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest

Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil

Agrobacterium-mediated transient transformation of sorghum leaves for accelerating functional genomics and genome editing studies

Biclique: an R package for maximal biclique enumeration in bipartite graphs

Metatranscriptomic dynamics after Verticillium dahliae infection and root damage in Olea europaea