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Data Notes

At BMC Research Notes, we recognise that valuable data often go unpublished when instead they could be helping to progress science. This is why we launched Data notes: a short article type allowing researchers to describe their data, sharing them with the research community and receiving credit for all their work - not just a finished article.

We present here all the Data notes published in the journal, a free and open resource for the scientific community. Why not join them and free your data too?

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  1. These data enable the development of both textual and speech based conversational machine learning models that can be used by expectant mothers to provide answers to challenges they face during the different t...

    Authors: Odongo Steven Eyobu, Brian Angoda Nyanga, Lukman Bukenya, Daniel Ongom and Tonny J. Oyana
    Citation: BMC Research Notes 2025 18:150
    Content type: Data Note Published on:

  2. The wild service tree, Sorbus torminalis (L.) Crantz, is a sub-Mediterranean forest tree species native to Europe, Asia Minor, Caucasus and north-western Africa. Despite its ecological and societal importance, pu...

    Authors: Sara Pinosio, Camilla Avanzi, Francesca Bagnoli, Ilaria Spanu, Giovanni Giuseppe Vendramin and Andrea Piotti
    Citation: BMC Research Notes 2025 18:139
    Content type: Data Note Published on:

  4. This study highlighted the gap in the genetic characterization of marine bacteria, specifically within the genus Thiohalocapsa. This genus thrives in contaminated environments with high concentrations of sulfide,...

    Authors: Guillermo Reyes, Irma Betancourt, Betsy Andrade, Yessenia Pozo, Lita Sorroza, Luis E. Trujillo and Bonny Bayot
    Citation: BMC Research Notes 2025 18:97
    Content type: Data Note Published on:

  5. This study aims to provide real-time surveillance of epidemiological outbreaks of avian influenza in humans and mammals. The primary objective is to understand and track the dynamics of outbreaks as they devel...

    Authors: Francesco Branda, Ranjan K. Mohapatra, Lawrence Sena Tuglo, Massimo Ciccozzi and Fabio Scarpa
    Citation: BMC Research Notes 2025 18:95
    Content type: Data Note Published on:

  6. Beta-lactamase is a bacterial enzyme that deactivates beta-lactam antibiotics, and it is one of the leading causes of antibiotic resistance problems globally. In current drug discovery research, molecular simu...

    Authors: Thanet Pitakbut, Jennifer Munkert, Wenhui Xi, Yanjie Wei and Gregor Fuhrmann
    Citation: BMC Research Notes 2025 18:91
    Content type: Data Note Published on:

  7. This data note documents influenza-like illness (ILI) notifications in Iran by county from 2015 to 2019 as a pre-COVID-19 dataset, providing individual and spatial data for further comprehensive spatiotemporal...

    Authors: Atieh Sedghian, Shahab MohammadEbrahimi, Benn Sartorius and Behzad Kiani
    Citation: BMC Research Notes 2025 18:72
    Content type: Data Note Published on:

  8. Nepenthes, sometimes known as tropical pitcher plants or monkey cups, is a carnivorous plant genus that contains more than 160 species. Nepenthes khasiana, India's sole representative of the genus, is a rare and ...

    Authors: Ruchishree Konhar, Debasis Dash and Devendra Kumar Biswal
    Citation: BMC Research Notes 2025 18:45
    Content type: Data Note Published on:

  9. The interrupted time series (ITS) design is commonly used to investigate the impact of an intervention or exposure in public health. There are many statistical methods that can be used to analyse ITS data and ...

    Authors: Simon L Turner, Elizabeth Korevaar, Amalia Karahalios, Andrew B Forbes and Joanne E McKenzie
    Citation: BMC Research Notes 2025 18:32
    Content type: Data Note Published on:

  10. This data note presents a comprehensive geodatabase of cardiovascular disease (CVD) hospitalizations in Mashhad, Iran, alongside key environmental factors such as air pollutants, built environment indicators, ...

    Authors: Shahab MohammadEbrahimi, Mohammad Dehghan and Behzad Kiani
    Citation: BMC Research Notes 2025 18:12
    Content type: Data Note Published on:

  11. This dataset contains demographic, morphological and pathological data, endoscopic images and videos of 191 patients with colorectal polyps. Morphological data is included based on the latest international gas...

    Authors: Mojgan Forootan, Mohsen Rajabnia, Ahmad R. Mafi, Hamed Azhdari Tehrani, Erfan Ghadirzadeh, Mahziar Setayeshfar, Zahra Ghaffari, Mohammad Tashakoripour, Mohammad Reza Zali and Hamidreza Bolhasani
    Citation: BMC Research Notes 2024 17:393
    Content type: Data Note Published on:

  13. Corallium rubrum, the precious red coral, is an octocoral endemic to the western Mediterranean Sea. Like most octocorals, it produces tiny, calcified structures called sclerites. Uniquely, it also produces a comp...

    Authors: Philippe Ganot, Tobias Rausch, Markus Hsi-Yang Fritz, Didier Zoccola, Xin Wang, Manuel Aranda, Vladimir Benes, Denis Allemand and Sylvie Tambutté
    Citation: BMC Research Notes 2024 17:375
    Content type: Data Note Published on:

  14. Image file fragment classification is a critical area of study in digital forensics. However, many publicly available datasets in this field are derived from a single source, often lacking consideration of the...

    Authors: Behnam Tavassoli, Zhino Naghshbandi and Mehdi Teimouri
    Citation: BMC Research Notes 2024 17:363
    Content type: Data Note Published on:

  15. Unresectable canine hepatocellular carcinoma (HCC) has limited nonsurgical treatment options. Sorafenib is a targeted therapy for unresectable canine HCC. However, there are limited reports on the expression o...

    Authors: Toshiyuki Tanaka, Tomoki Motegi, Misaki Mori, Nanami Sumikawa, Kaito Maeda, Yasumasa Iimori and Hideo Akiyoshi
    Citation: BMC Research Notes 2024 17:357
    Content type: Data Note Published on:

  16. Despite the advances in genomics, repetitive DNAs (repeats) are still difficult to sequence, assemble, and identify. This is due to their high abundance and diversity, with many repeat families being unique to...

    Authors: Nicola Schmidt, Sophie Maiwald, Ludwig Mann, Beatrice Weber, Kathrin M. Seibt, Sarah Breitenbach, Susan Liedtke, Gerhard Menzel, Bernd Weisshaar, Daniela Holtgräwe and Tony Heitkam
    Citation: BMC Research Notes 2024 17:351
    Content type: Data Note Published on:

  17. These data enable the development of machine learned models to detect unintended passage of salmonids over in-stream barriers. Such models are key to fully characterizing the effectiveness of selective passage...

    Authors: Sethu Mettukulam Jagadeesan, Jonathan Gregory, Jordan Leh, Jesse Eickholt and Daniel P. Zielinski
    Citation: BMC Research Notes 2024 17:348
    Content type: Data Note Published on:

  18. The primary metabolite contents of ripe fruits result from complex regulations during their development. For Solanaceae, these regulations have been widely studied in tomato. The fruit metabolite contents of o...

    Authors: Léa Roch, Catherine Deborde, Daniel Jacob, Anaïs Clavé, Marguerite Batsale, Yves Gibon and Annick Moing
    Citation: BMC Research Notes 2024 17:337
    Content type: Data Note Published on:

  20. Recent advances in bio-inspired navigation have sparked interest in the phenomenon of skylight polarization. This interest stems from the potential of skylight-based orientation sensors, which performance can ...

    Authors: Léo Poughon, Vincent Aubry, Jocelyn Monnoyer, Stéphane Viollet and Julien R Serres
    Citation: BMC Research Notes 2024 17:306
    Content type: Data Note Published on:

  22. The Social Accounting Matrix (SAM) is an extension of Input-Output tables that records macro and meso-economic accounts of a socio-economic system. Its main objective is to provide a comprehensive understandin...

    Authors: Kevin Connolly, Andrew Ross and Stefan Vögele
    Citation: BMC Research Notes 2024 17:262
    Content type: Data Note Published on:

  24. In recent years, there has been much discussion and research on electronic nose (e-nose). This topic has developed mainly in the medical and food fields. Typically, e-nose is combined with machine learning alg...

    Authors: Dedy Rahman Wijaya, Rini Handayani, Muhammad Dzakyyuddin Badri, Shabri Shabri and Vitria Puspitasari Rahadi
    Citation: BMC Research Notes 2024 17:244
    Content type: Data Note Published on:

  26. Recognition of mobile applications within encrypted network traffic holds considerable effects across multiple domains, encompassing network administration, security, and digital marketing. The creation of net...

    Authors: Marziyeh Bayat, Javad Garshasbi, Mozhgan Mehdizadeh, Neda Nozari, Abolghasem Rezaei Khesal, Maryam Dokhaei and Mehdi Teimouri
    Citation: BMC Research Notes 2024 17:165
    Content type: Data Note Published on:

  27. Due to the COVID-19 pandemic and the shortage of the National Institute for Occupational Safety & Health (NIOSH)-approved N95 respirators, the Food and Drug Administration granted an Emergency Use Authorizatio...

    Authors: Kwai Yu Tsui, Yu Wang and Simon Ching Lam
    Citation: BMC Research Notes 2024 17:156
    Content type: Data Note Published on:

  28. The G72 mouse model of schizophrenia represents a well-known model that was generated to meet the main translational criteria of isomorphism, homology and predictability of schizophrenia to a maximum extent. I...

    Authors: Anna Papazoglou, Christina Henseler, Sandra Weickhardt, Johanna Daubner, Teresa Schiffer, Karl Broich, Jürgen Hescheler, Agapios Sachinidis, Dan Ehninger, Britta Haenisch and Marco Weiergräber
    Citation: BMC Research Notes 2024 17:143
    Content type: Data Note Published on:

  29. Due to the limitations of Twitter, the expansion of Telegram channels, and the Telegram API’s easy use, Telegram comments have become prevalent. Telegram is one of the most popular social networks, unlike Twit...

    Authors: Kia Jahanbin, Mohammad Ali Zare Chahooki, Mahdi Yazdian-Dehkordi and Fereshte Rahmanian
    Citation: BMC Research Notes 2024 17:135
    Content type: Data Note Published on:

  30. Bovine seminal plasma proteins perform several functions related to sperm function. Changes in the expression pattern or abundance of seminal proteins are related to changes in the fertilizing capacity of bull...

    Authors: Camilo Jose Ramirez-Lopez, Edvaldo Barros, Pedro Marcus Vidigal, Lidiany Lopes Gomes, Maria Cristina Baracat-Pereira, Simone Eliza Facioni Guimarães and José Domingos Guimarães
    Citation: BMC Research Notes 2024 17:132
    Content type: Data Note Published on:

  32. Cancer is a global health challenge with complex characteristics. Despite progress in research and treatment, a universally effective prevention strategy is lacking. Access to reliable information, especially ...

    Authors: Sharareh Faramarzi, Behzad Kiani, Mohammedreza Hoseinkhani and Neda Firouraghi
    Citation: BMC Research Notes 2024 17:83
    Content type: Data Note Published on:

  33. The Peruvian Andean region is an important center for plant domestication. However, to date, there have been few genetic studies on native grain, which limits our understanding of their genetic diversity and t...

    Authors: Flavio Aliaga, Mario Zapata-Cruz and Silvia Ana Valverde-Zavaleta
    Citation: BMC Research Notes 2024 17:69
    Content type: Data Note Published on:

  34. The collection of genotype data was conducted as an essential part of a pivotal research project with the goal of examining the genetic variability of skin, hair, and iris color among the Kazakh population. Th...

    Authors: Alizhan Bukayev, Baglan Aidarov, Denis Fesenko, Viktoriya Saidamarova, Ivan Ivanovsky, Elina Maltseva, Dinara Naizabayeva, Ayagoz Bukayeva, Bekzhan Faizov, Vladimir Pylev, Akynkali Darmenov, Yuriy Skiba, Elena Balanovska and Maxat Zhabagin
    Citation: BMC Research Notes 2024 17:51
    Content type: Data Note Published on:

  35. Computed tomography (CT) was a widely used diagnostic technique for COVID-19 during the pandemic. High-Resolution Computed Tomography (HRCT), is a type of computed tomography that enhances image resolution thr...

    Authors: Iraj Abedi, Mahsa Vali, Bentolhoda Otroshi, Maryam Zamanian and Hamidreza Bolhasani
    Citation: BMC Research Notes 2024 17:32
    Content type: Data Note Published on:

  36. The data was collected for a cohort study to assess the capability of thermal videos in the detection of SARS-CoV-2. Using this data, a published study applied machine learning to analyze thermal image feature...

    Authors: Sofia Rojas-Zumbado, Jose-Gerardo Tamez-Peña, Andrea-Alejandra Trevino-Ferrer, Carlos-Andres Diaz-Garza, Meritxell Ledesma-Hernández, Alejandra-Celina Esparza-Sandoval, Rocio Ortiz-Lopez, Guillermo Torre-Amione, Servando Cardona-Huerta and Victor Trevino
    Citation: BMC Research Notes 2024 17:30
    Content type: Data Note Published on:

  37. This article presents the process of extraction and treatment of two datasets from the General Ombudsman of the Brazilian Unified Health System (OUVSUS). The resulting datasets allow the analysis of manifestat...

    Authors: Raphael de Freitas Saldanha, Vinicius Kreischer, Raquel Gritz, Matheus Miloski, Carmen Lúcia Corrêa Bonifácio, Carlos Leonardo Souza Cardoso, Ariane Camilo Pinheiro Alves, Domício Aurélio de Sá, Garibaldi Dantas Gurgel Junior, Rafael da Silveira Moreira, Michelle Vieira Fernandez, Jefferson da Costa Lima and Marcel Pedroso
    Citation: BMC Research Notes 2024 17:18
    Content type: Data Note Published on:

  38. Candida albicans, a polymorphic yeast, is one of the most common, opportunistic fungal pathogens of humans. Among the different morphological forms, opaque form is one of the least-studied ones. This opaque pheno...

    Authors: Gajanan Zore, Mazen Abdulghani, Santosh Kodgire, Rubina Kazi, Amruta Shelar and Rajendra Patil
    Citation: BMC Research Notes 2024 17:2
    Content type: Data Note Published on:

  40. The data provided herein represent the whole-genome sequencing data associated with three sheep breeds of Iranian native breeds. Sheep are the first domesticated animals that, during the long path of the evolu...

    Authors: Leila Mohammadipour Saadatabadi, Mohammadreza Mohammadabadi, Zeinab Amiri Ghanatsaman, Olena Babenko, Ruslana Volodymyrivna Stavetska, Oleksandr Mikolayovich Kalashnik, Volodymyr Afanasenko, Oleksandr Anatoliiovych Kochuk-Yashchenko, Dmytro Mykolaiovych Kucher and Hojjat Asadollahpour Nanaei
    Citation: BMC Research Notes 2023 16:353
    Content type: Data Note Published on:

  43. Soil fauna plays a crucial role in contributing to litter breakdown, accelerating the decomposition rate and enhancing the biogeochemical cycle in terrestrial ecosystems. Comprehending the specific fauna role ...

    Authors: Dangjun Wang, Wuyang Xie, Fang Yuan, Chaochao Deng, Ruimin Qin and Huakun Zhou
    Citation: BMC Research Notes 2023 16:321
    Content type: Data Note Published on:

  44. Pythium insidiosum causes a difficult-to-treat infectious condition called pythiosis, with high morbidity and mortality. So far, genome data of at least 10 strains of P. insidiosum, primarily classified in the ph...

    Authors: Theerapong Krajaejun, Preecha Patumcharoenpol, Thidarat Rujirawat, Weerayuth Kittichotirat and Sithichoke Tangphatsornruang
    Citation: BMC Research Notes 2023 16:316
    Content type: Data Note Published on:

  45. The interferon-triggered innate immune response has been observed to be under strong diversifying selection to counteract the many pathogens hosts have to defend against. In particular, rewiring of gene transc...

    Authors: Daniel Ramirez, Edward B. Chuong and Robin D. Dowell
    Citation: BMC Research Notes 2023 16:292
    Content type: Data Note Published on:

  46. To investigate first, the level, distribution, patterns and prevalence of seven-day, objectively-measured physical activity (ambulation) in a rural health and demographic surveillance system (HDSS) site in Sou...

    Authors: Ian Cook
    Citation: BMC Research Notes 2023 16:284
    Content type: Data Note Published on:

  47. To assess risk factors for HPV infection, determine knowledge about HPV vaccines, assess willingness to receive the HPV vaccine among adolescent and early adult girls in Nigeria, we administered a structured q...

    Authors: Nanma T. Cosmas, Lohya Nimzing, Daniel Z. Egah, Oluranti A. Famooto, Sally N. Adebamowo and Clement A. Adebamowo
    Citation: BMC Research Notes 2023 16:272
    Content type: Data Note Published on:

  48. Pythium insidiosum is the causative agent of pythiosis, a difficult-to-treat condition, in humans and animals worldwide. Biological information about this filamentous microorganism is sparse. Genomes of several P...

    Authors: Theerapong Krajaejun, Preecha Patumcharoenpol, Thidarat Rujirawat, Weerayuth Kittichotirat, Sithichoke Tangphatsornruang, Tassanee Lohnoo and Wanta Yingyong
    Citation: BMC Research Notes 2023 16:271
    Content type: Data Note Published on:

  49. The aim of this data paper is to describe a collection of 33 genomic, transcriptomic and epigenomic sequencing datasets of the B-cell acute lymphoblastic leukemia (ALL) cell line REH. REH is one of the most fr...

    Authors: Mariya Lysenkova Wiklander, Elin Övernäs, Johanna Lagensjö, Amanda Raine, Anna Petri, Ann-Christin Wiman, Jon Ramsell, Yanara Marincevic-Zuniga, Henrik Gezelius, Tom Martin, Ignas Bunikis, Sara Ekberg, Rikard Erlandsson, Pontus Larsson, Mai-Britt Mosbech, Susana Häggqvist…
    Citation: BMC Research Notes 2023 16:265
    Content type: Data Note Published on: